Numerical Analyses of Weakly Nonlinear Velocity-Density Coupling

We study evolution of various statistical quantities of smoothed cosmic density and velocity fields using N-body simulations. The parameter $C\equiv /( )$ characterizes nonlinear coupling of these two fields and determines behavior of bulk velocity dispersion as a function of local density contrast. It is found that this parameter depends strongly on the smoothing scale even in quasi-linear regimes where the skewness parameter $S_3$ is nearly constant and close to the predicted value by the second-order perturbation theory. We also analyze weakly nonlinear effects caused by an adaptive smoothing known as the gather approach.Comment: 22 pages, 4 figures, to appear in ApJ (558, Sep 10

Correlation analysis of stochastic gravitational wave background around 0.1-1Hz

We discuss prospects for direct measurement of stochastic gravitational wave background around 0.1-1Hz with future space missions. It is assumed to use correlation analysis technique with the optimal TDI variables for two sets of LISA-type interferometers. The signal to noise for detection of the background and the estimation errors for its basic parameters (amplitude, spectral index) are evaluated for proposed missions.Comment: 11 pages, 7 figures, revised version, to appear in PR

LISA Measurement of Gravitational Wave Background Anisotropy: Hexadecapole Moment via a Correlation Analysis

We discuss spatial fluctuations in the gravitational wave background arising from unresolved Galactic binary sources, such as close white dwarf binaries, due to the fact the galactic binary source distribution is anisotropic. We introduce a correlation analysis of the two data streams of the Laser Interferometer Space Antenna (LISA) to extract spherical harmonic coefficients, in an independent manner, of the hexadecapole moment ($l=4$) related to the projected two-dimensional density distribution of the binary source population. The proposed technique complements and improves over previous suggestions in the literature to measure the gravitational wave background anisotropy based on the time modulation of data as LISA orbits around the Sun. Such techniques, however, are restricted only to certain combinations of spherical harmonic coefficients of the galaxy with no ability to separate them individually. With LISA, $m=2,3$ and 4 coefficients of the hexadecapole ($l=4$) can be measured with signal-to-noise ratios at the level of 10 and above in a certain coordinate system. In addition to the hexadecapole coefficients, when combined with the time modulation analysis, the correlation study can also be used, in principle, to measure quadrupole coefficients of the binary distribution.Comment: 8 pages, 2 figure

Signature of the Overhauser field on the coherent spin dynamics of donor-bound electron in a single CdTe quantum well

We have studied the coherent spin dynamics in an oblique magnetic field of electrons localized on donors and placed in the middle of a single CdTe quantum well, by using a time-resolved optical technique: the photo-induced Faraday rotation. We showed that this dynamics is affected by a weak Overhauser field created via the hyperfine interaction of optically spin-polarized donor-bound electrons with the surrounding nuclear isotopes carrying non-zero spins. We have measured this nuclear field, which is on the order of a few mT and can reach a maximum experimental value of 9.4 mT. This value represents 13 % of the maximal nuclear polarization, and corresponds also to 13 % of maximal electronic polarization.Comment: 15 pages, 4 figure

CGUG: in silico proteome and genome parsing tool for the determination of "core" and unique genes in the analysis of genomes up to ca. 1.9 Mb

<p>Abstract</p> <p>Background</p> <p>Viruses and small-genome bacteria (~2 megabases and smaller) comprise a considerable population in the biosphere and are of interest to many researchers. These genomes are now sequenced at an unprecedented rate and require complementary computational tools to analyze. "CoreGenesUniqueGenes" (CGUG) is an <it>in silico </it>genome data mining tool that determines a "core" set of genes from two to five organisms with genomes in this size range. Core and unique genes may reflect similar niches and needs, and may be used in classifying organisms.</p> <p>Findings</p> <p>CGUG is available at <url>http://binf.gmu.edu/geneorder.html</url> as a web-based on-the-fly tool that performs iterative BLASTP analyses using a reference genome and up to four query genomes to provide a table of genes common to these genomes. The result is an <it>in silico </it>display of genomes and their proteomes, allowing for further analysis. CGUG can be used for "genome annotation by homology", as demonstrated with <it>Chlamydophila </it>and <it>Francisella </it>genomes.</p> <p>Conclusion</p> <p>CGUG is used to reanalyze the ICTV-based classifications of bacteriophages, to reconfirm long-standing relationships and to explore new classifications. These genomes have been problematic in the past, due largely to horizontal gene transfers. CGUG is validated as a tool for reannotating small genome bacteria using more up-to-date annotations by similarity or homology. These serve as an entry point for wet-bench experiments to confirm the functions of these "hypothetical" and "unknown" proteins.</p

Brief report: reduction in the frequency of needle recapping by effective education: a need for conceptual alteration

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Detecting the Cosmic Gravitational Wave Background with the Big Bang Observer

The detection of the Cosmic Microwave Background Radiation (CMB) was one of the most important cosmological discoveries of the last century. With the development of interferometric gravitational wave detectors, we may be in a position to detect the gravitational equivalent of the CMB in this century. The Cosmic Gravitational Background (CGB) is likely to be isotropic and stochastic, making it difficult to distinguish from instrument noise. The contribution from the CGB can be isolated by cross-correlating the signals from two or more independent detectors. Here we extend previous studies that considered the cross-correlation of two Michelson channels by calculating the optimal signal to noise ratio that can be achieved by combining the full set of interferometry variables that are available with a six link triangular interferometer. In contrast to the two channel case, we find that the relative orientation of a pair of coplanar detectors does not affect the signal to noise ratio. We apply our results to the detector design described in the Big Bang Observer (BBO) mission concept study and find that BBO could detect a background with $\Omega_{gw} > 2.2 \times 10^{-17}$.Comment: 15 pages, 12 Figure